Insertion junction: CLIP2.059293_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059293
Chromosome:chromosome 9
Location:2697522
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g391753 3'UTR
Cre09.g801023 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTATATTTCATCGCCGACATCACCGCTGACATGAGCGTAGACTGAGCA
Internal bar code:ATAGAGACTCTATGTGCACGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTCAGGCGCTGTTGCAAG
Suggested primer 2:TCGGGGGCATCTTTTGAGTC