Insertion junction: CLIP2.059294_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059294
Chromosome:chromosome 2
Location:7246549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g391134 (1 of 16) IPR003903 - Ubiquitin interacting motif 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCTTCGAGAACCATAATCGTTGTTCAGGATCAGAAATGTCCTGCGGCA
Internal bar code:AAGCTGTGTGATGGAGTGCGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1330
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:CGAATGCATGTGTCTCGCAG
Suggested primer 2:TGCATTCCAGTTGCAACGTG