Insertion junction: CLIP2.059295_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059295
Chromosome:chromosome 3
Location:4990321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179550 TF2H2 (1 of 1) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1); Transcription factor TFIIH, 44 kDa subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAATAGAAAGCAAAGTCAAGCTAGATTAAATTGAGCGGCTGTGTGGCG
Internal bar code:TCTTGACCTCTGTAAAGAGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2275
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CACATAGCGGATCATGCCCT
Suggested primer 2:CCAGGTTGATTTTGGTGGCG