Insertion junction: CLIP2.059295_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059295
Chromosome:chromosome 3
Location:4990330
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g179550 TF2H2 (1 of 1) K03142 - transcription initiation factor TFIIH subunit 2 (TFIIH2, GTF2H2, SSL1); Transcription factor TFIIH, 44 kDa subunit 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTATTGAGATATAAAGGACCCGGAACGGAATAGACGAGAGGGAGAGGCA
Internal bar code:CCCGAGTTCCTTGAGCCGCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2686
LEAP-Seq percent confirming:93.5185
LEAP-Seq n confirming:101
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:108

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGGTTGATTTTGGTGGCG
Suggested primer 2:CACATAGCGGATCATGCCCT