Insertion junction: CLIP2.059296_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059296
Chromosome:chromosome 2
Location:5906405
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117650 GT90F2,GT90-2 (1 of 4) PTHR12203//PTHR12203:SF35 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // SUBFAMILY NOT NAMED; Glycosyltransferase GT90 family protein 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAGCATGTGATGGCTCGGCGTCTTCGGGTGCTGGGACTGTCCCCTCTGT
Internal bar code:GCATTTATACACCTCTCTAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3362
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGGAAAGCCAGAGAGCA
Suggested primer 2:GTGTGTGGCTCCTTGTCGTA