Insertion junction: CLIP2.059310_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059310
Chromosome:chromosome 1
Location:7176353
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051450 (1 of 2) PF13867 - Sin3 binding region of histone deacetylase complex subunit SAP30 (SAP30_Sin3_bdg) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCTGCACGCATGACATTCCTTCTACCGGGAAAATCCGGCCTGGCTGC
Internal bar code:AGGGATTGTGAGAGTGGCCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:6454
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:127
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:127

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGTTGGCCAGCAAGTTG
Suggested primer 2:CGGTTGTGGTCGTTGCATTT