Insertion junction: CLIP2.059310_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059310
Chromosome:chromosome 1
Location:7176355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051450 (1 of 2) PF13867 - Sin3 binding region of histone deacetylase complex subunit SAP30 (SAP30_Sin3_bdg) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGGCCCCTCGTATTGAAGATGTATTGTCAGTAGTACGGTAGGGCTTGT
Internal bar code:ACGGATGGAGGTGCGTCCTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3703
LEAP-Seq percent confirming:86.8132
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:91

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTTGTGGTCGTTGCATTT
Suggested primer 2:GTCTGTTGGCCAGCAAGTTG