Insertion junction: CLIP2.059311_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059311
Chromosome:chromosome 2
Location:6007654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g118650 PHC47 Pherophorin-chlamydomonas homolog 47; (1 of 71) PF12499 - Pherophorin (DUF3707) outside_mRNA
lncRNA_TCONS_00232151 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCATGCTAGGCGAGACATGTCGGGGACATGTCGCCGGCTCTCACTCTC
Internal bar code:TGCAGCGGACATTTGTGTCTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3198
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:73
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:GGACAGCGCTCCAAGTAAGT
Suggested primer 2:ATGATACTACGCGTGCCAGG