Insertion junction: CLIP2.059313_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059313
Chromosome:chromosome 5
Location:172106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242650 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTCTCCTCAGACCGGGAAGAGCACACCCCATCTAACACCACGTAATGT
Internal bar code:TTATAAGCTGACTTCCCGACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:761
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCAACACGACACAACTGCAT
Suggested primer 2:ACTTCCTTTGTTTCCCGGCT