Insertion junction: CLIP2.059313_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059313
Chromosome:chromosome 13
Location:3998991
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g590400 (1 of 1) PF00041//PF04969 - Fibronectin type III domain (fn3) // CS domain (CS) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCGACATGTCCTGGCTCAGCAGCTTTCGGCGCCTGCGCCGCAAGGCCA
Internal bar code:CCCGTTGCTCATTGATTTAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2964
LEAP-Seq percent confirming:46.875
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACGCGTCACACTGCATT
Suggested primer 2:GCCTGCGCAACAAAGAAGAA