Insertion junction: CLIP2.059328_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059328
Chromosome:chromosome 14
Location:3500964
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g630700 (1 of 2) IPR006212//IPR009030//IPR011641 - Furin-like repeat // Insulin-like growth factor binding protein, N-terminal // Tyrosine-protein kinase ephrin type A/B receptor-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGAAGGCCGGCGAGAATGCGGAATCAAGGCTGCCATAGTACCCTGGTAC
Internal bar code:ATTGTCGGAGTGTATTGGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:939
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCGAGTTGTTTTCTCCCG
Suggested primer 2:GAGGGCATCGTGACTACTCG