Insertion junction: CLIP2.059329_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059329
Chromosome:chromosome 16
Location:5363891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g683400 (1 of 10) PTHR10174 - RETINALDEHYDE BINDING PROTEIN-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCATCTTTATCGCTTGCCGCTCGTAGCGTGTGTCCAAATCAAACGTGGT
Internal bar code:GGTTATGTTACATTGCATGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1913
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:79

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCTCAAGCCGTACAACT
Suggested primer 2:GGTCAACGTGTTTGTGTCGG