Insertion junction: CLIP2.059332_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059332
Chromosome:chromosome 13
Location:1598667
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573300 CDD4 (1 of 1) K11991 - tRNA(adenine34) deaminase [EC:3.5.4.33] (tadA); Cytosine deaminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCTAATAATAGGGCGGAATCTGGAGAAATGTCCTGAACTTGACATACC
Internal bar code:ATCGTAGTCCGGCCGTGTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:3890
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:ACATTTGCGTGTTCAACCCG
Suggested primer 2:GCCAACAGCACTGCATGATC