Insertion junction: CLIP2.059339_5

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059339
Chromosome:chromosome 16
Location:4946549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686550 (1 of 1) PF12400 - Vaculolar membrane protein (DUF3661) 3'UTR
Cre16.g686552 (1 of 1) 3.6.1.12 - dCTP diphosphatase / Deoxycytidine-triphosphatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTGCAGCCCGCTCTTGCCAAGTGGCACCTGATGCGTACATACGGTAT
Internal bar code:AAGGTTAGATAGCCTGATTTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:873
LEAP-Seq percent confirming:95.1219
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGCGGAACTTGAGGAAGG
Suggested primer 2:CATGCCGGCATGTGGTATTG