Insertion junction: CLIP2.059340_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059340
Chromosome:chromosome 17
Location:980483
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703050 (1 of 97) PF13650 - Aspartyl protease (Asp_protease_2) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGCAACGCCCTCACGACCCCTCACGGCCGGCCAAACTCAGACGCCGCCG
Internal bar code:AGCCTAAAGGTGGCGGGCGCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGCACCGACTCTTTCTCC
Suggested primer 2:GCTCCGGGAACAAACACAAC