Insertion junction: CLIP2.059342_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059342
Chromosome:chromosome 12
Location:3964668
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515550 VPS33 SM/Sec1-family protein; (1 of 1) PTHR11679//PTHR11679:SF1 - VESICLE PROTEIN SORTING-ASSOCIATED // VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 33B 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGCCAAGGGCAGAACAGCGGGCATCCGCTCTAGCGGGTCTGGCCTC
Internal bar code:GCTCGCGCTGAATGGCGTAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:2311
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGCGCAACGTCTTCCTTG
Suggested primer 2:GAGATATCGGCTCTGCGCTT