Insertion junction: CLIP2.059344_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059344
Chromosome:chromosome 10
Location:5225459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g456100 FAP142,POC21,AGG3 (1 of 4) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA); Aggregation 3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATGGATACTCTGCCCGTACACGGTCCCATACTGCCGAAAGACGGGCAA
Internal bar code:ACATATATATGATCAAGATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3647
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCGCGTTCTAATTAAGC
Suggested primer 2:CCATGGCAAAGCGTGATAGC