Insertion junction: CLIP2.059348_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059348
Chromosome:chromosome 6
Location:3440896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278102 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGCGCCTCGCGGGCTTCGAAAAGTTCCCGACACCGGTGCACATCTTAT
Internal bar code:TACTGCGCGGAAAGCGCCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3406
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTGTTGAGCAGCAGGTG
Suggested primer 2:GAGTGCGGTCAAAGGTACCA