Insertion junction: CLIP2.059354_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059354
Chromosome:chromosome 11
Location:2156092
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467739 IFT54,Traf3ip1,FAP116,Dyf-11Elipsa Intraflagellar Transport Protein 54; (1 of 1) PTHR31363:SF0 - TRAF3-INTERACTING PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAGATGGCGCTTTAGCTTGTCCTGCTCGATCTTGCGGATGAGGCTGG
Internal bar code:CAGGACGGGTCGGCACAAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1954
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GACACAGTGTTTGTCGTGCC
Suggested primer 2:TGTGTTACTGGGATGTGGCC