Insertion junction: CLIP2.059355_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059355
Chromosome:chromosome 13
Location:929549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g568000 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCGTGGTCACTAGGCAGCGCAACCCGGCAGAAAACACACCTCGTACC
Internal bar code:CGCGAGGGTGCGCTGAGGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1494
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TAACAGCTAGGATCAGCGCG
Suggested primer 2:CGATACACTTGCTTCGCTGC