Insertion junction: CLIP2.059362_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059362
Chromosome:chromosome 13
Location:1557575
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g572950 E2F2,E2FR1 Transcription factor, E2F and DP-related; (1 of 2) PTHR12548//PTHR12548:SF9 - TRANSCRIPTION FACTOR DP // TRANSCRIPTION FACTOR DP 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGGCCCTGCACGGACGCGTCGCCGTCACTCGAGATGAAGCCAAACGA
Internal bar code:CTAGGCAACGACCAGGAGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1474
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:ATGACACGTGCTGCAACAAC
Suggested primer 2:CAACTCCAGGTTGCTGCAAC