Insertion junction: CLIP2.059363_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059363
Chromosome:chromosome 1
Location:7174379
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g051450 (1 of 2) PF13867 - Sin3 binding region of histone deacetylase complex subunit SAP30 (SAP30_Sin3_bdg) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCAGCTTGCTTTTGCGCTTTCGCCGTAAAACTTTCGCCATAAAACTGA
Internal bar code:GCGGTCGCGGACAAAATTCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1923
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCATGGCCATGATGAACG
Suggested primer 2:AGGTACAGGAGTGCATGCAC