Insertion junction: CLIP2.059366_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.059366
Chromosome:chromosome 2
Location:601772
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g077350 HDH1 Histidinol dehydrogenase; (1 of 1) 1.1.1.23 - Histidinol dehydrogenase 5'UTR
Cre02.g077401 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTACCCTAAGTTGTTGTCCCCCATCCAGTGAGCATTGGCACAAAAGTGC
Internal bar code:TTTGAATGCGACATCGGTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1996
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTTTGGTGAAATCCCGGTGC
Suggested primer 2:TGACTTGGTGGACGCTTACC