Insertion junction: CLIP2.059376_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059376
Chromosome:chromosome 10
Location:4860401
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g453500 RWP15 (1 of 17) IPR003035 - RWP-RK domain; RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAAGGAAAAAAGGTGCGTGGGGGCCGCCGTGTGGTGGGTTGCCGGAGT
Internal bar code:CAGGAACGGCGGACTGATGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:522
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGTCAGATTGGCGAAGT
Suggested primer 2:GCTCTCTCCCTACCTTTCGC