Insertion junction: CLIP2.059378_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059378
Chromosome:chromosome 11
Location:1494981
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g469150 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCCCGCACCACAACAGTCCCAAGCATGTCCACCACACACGCACACAAG
Internal bar code:TATCTAGACGGTGTCAGTTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:139
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TGATCATGGAGTGGGTTGGC
Suggested primer 2:AATTTTACTCCTGCGCCGGA