Insertion junction: CLIP2.059384_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059384
Chromosome:chromosome 17
Location:2640231
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g716700 (1 of 77) IPR029071 - Ubiquitin-related domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGTTCAGGAAGTACACAGCACCAGCCAATGCTTGGGAAGGCGTGTGGG
Internal bar code:ATGAATGGTCCACCCCGGTCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:845
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGCAGTGGTAGGGTCTTT
Suggested primer 2:TTCGCCTACACTTGGTGCAT