Insertion junction: CLIP2.059385_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.059385
Chromosome:chromosome 16
Location:7842596
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g688863 (1 of 8) IPR001810//IPR006553 - F-box domain // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGTGGGGCAGGGAAGGGGGCGGTGTGTGTGTGTGTTAGGCGCAGGGCG
Internal bar code:CATGTTCTCAGTCGTGTGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:413
LEAP-Seq percent confirming:36.3636
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCACGTTAAGAAAGCGCA
Suggested primer 2:GAGAGAAACGCACACAGGGA