Insertion junction: CLIP2.059386_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059386
Chromosome:chromosome 9
Location:3693854
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397290 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGTTGCAATGAGCACTGAAACCGTCGTGTTGTTGTGGTGCGTTGCGCA
Internal bar code:GCTGCCGTGTTGGCTGGTAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1853
LEAP-Seq percent confirming:80.8511
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGCAGAGCGCAGGTAAA
Suggested primer 2:CCTTGGATTATGCGCAGTGC