Insertion junction: CLIP2.059387_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059387
Chromosome:chromosome 6
Location:7988655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g304600 (1 of 1) PTHR22778:SF18 - RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 8, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTGATGTGTCGCCTGCCGGGAGACAATGAAGGCGACCCCGCACCGTT
Internal bar code:GCGAGGGTGTGAGCTCTGCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1447
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCAAGCAGTTGGTCAGG
Suggested primer 2:ATACTGCTCGTGCCGTTGAA