Insertion junction: CLIP2.059394_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059394
Chromosome:chromosome 3
Location:4798929
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGATGTACTGTTGGGGTAAAGCGGCGGTGCTGTAACTGCTTCGGGAG
Internal bar code:CAAGAACTATTCTACGCGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3492
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGCTCGGATGCGTGTTTA
Suggested primer 2:AGTAAACAACGAGGGCGAGG