Insertion junction: CLIP2.059394_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059394
Chromosome:chromosome 3
Location:4798934
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g178000 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTATCAGTCTCCAGCCTCCGGGCCAGCCCTAAAATGGTGCCCAGTGTG
Internal bar code:CGTCCGACTCAATGGTGGAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3718
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:AGTAAACAACGAGGGCGAGG
Suggested primer 2:AAGGCTCGGATGCGTGTTTA