Insertion junction: CLIP2.059398_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059398
Chromosome:chromosome 3
Location:5979461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189300 PLAP10,PLP10 (1 of 17) PF04755 - PAP_fibrillin (PAP_fibrillin); Plastid lipid associated protein 10 5'UTR
Cre03.g189350 (1 of 1) PTHR36352:SF1 - EXPRESSED PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACATACCCACCGCATCCACCTCAGCATCAAACGTGCGCTGCACGCCCGC
Internal bar code:CAAAGTTCGGAAACGAAGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4418
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:126
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:126

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGATGTCGCCCGGTACC
Suggested primer 2:ACAGCAACGAGGCGAAGTTA