Insertion junction: CLIP2.059404_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.059404
Chromosome:chromosome 17
Location:5336288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738050 AGG4 Aggregation 4; (1 of 6) PTHR15907:SF21 - DUF614 FAMILY PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGACGATAGGGGGCTACACTATGTGCGTGCAGCATGCAGCATGTGTGC
Internal bar code:CACGCACGGTTATATTTTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:6319
LEAP-Seq percent confirming:98.3146
LEAP-Seq n confirming:175
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:178

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAATGCACAGCCCTGTAG
Suggested primer 2:GGCTGTTGACAACTGTGCTG