Insertion junction: CLIP2.059408_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.059408
Chromosome:chromosome 10
Location:5142771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455500 GTF4 (1 of 2) PF17035 - Bromodomain extra-terminal - transcription regulation (BET); Global Transcription factor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGCTAGGGTGGCGGCAAGCGCCAGGGAGCGAAGAGCAGTGGGGGCGT
Internal bar code:GGCCGGTTGCGGGAATGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2051
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTCCGAGAAGTTGTTCA
Suggested primer 2:GCCAACTCACGAAGTCTCCA