Insertion junction: CLIP2.059410_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059410
Chromosome:chromosome 16
Location:4973441
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g686350 (1 of 1) IPR000738//IPR009068 - WHEP-TRS domain // S15/NS1, RNA-binding 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGACGGGTGTTGGGGGTGGTGGCGACTACTGGTGGTGGCGGCGGCACG
Internal bar code:AGACGCGGGTGTGTCCACCTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1080
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCACCAACCTGCCTTTGC
Suggested primer 2:CCCCATCCTCCTCCTCTTCA