Insertion junction: CLIP2.059413_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059413
Chromosome:chromosome 17
Location:463176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g698950 (1 of 1) K09140 - pre-rRNA-processing protein TSR3 (TSR3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGACTGGCGGTTGTGTGCACGTGGTGGGTGGGCCTGACGAATCGCCG
Internal bar code:GGCCTAAGTTGATATCCGGTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1476
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAGCCGAAAGTGTGAGGG
Suggested primer 2:CGCATTTGCTGTCGCTCTAC