Insertion junction: CLIP2.059417_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059417
Chromosome:chromosome 1
Location:701347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003950 (1 of 28) PTHR31600:SF2 - TINY MACROCYSTS PROTEIN B-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTCGCATCTTGTTTTCAGAGCAATGTCTAGGCTCAGACAAAAACGGCC
Internal bar code:TGGAATTCAGCTGAGTTGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1998
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGCATTACGCTAGTGC
Suggested primer 2:GGAAGTCACGTGCTGAGTGA