Insertion junction: CLIP2.059417_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059417
Chromosome:chromosome 1
Location:701355
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g003950 (1 of 28) PTHR31600:SF2 - TINY MACROCYSTS PROTEIN B-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTGAGGAACCGAGGTTACAGACCGCTTTGGTCCCTGCACGTCCACGAC
Internal bar code:GGCGTCGGATAGGGAAGAGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1782
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGTCACGTGCTGAGTGA
Suggested primer 2:CCGTTGCATTACGCTAGTGC