Insertion junction: CLIP2.059424_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059424
Chromosome:chromosome 16
Location:2427341
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g659900 5'UTR
Cre16.g659950 PRPS5 Chloroplast Ribosomal Protein S5; (1 of 2) K02988 - small subunit ribosomal protein S5 (RP-S5, MRPS5, rpsE) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACGCATGATAACCGGGCTCGGCACAATCGACCCATGATGCATGGCGC
Internal bar code:GCCTTTGATGCCAAAGAAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3488
LEAP-Seq percent confirming:98.9583
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATCTGCTTCATCGCCTC
Suggested primer 2:TCTTGCAGCCCTTGATCAGG