Insertion junction: CLIP2.059425_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059425
Chromosome:chromosome 2
Location:6823640
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388282 bS18m,MRPS18 Mitochondrial ribosomal protein S18; (1 of 2) PF01084 - Ribosomal protein S18 (Ribosomal_S18) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTGCTTCCTGCAAACCAGTTGCTACTACATTATTACAATCCTGTGCGC
Internal bar code:ACTATTTACTGTTGTCGGTGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:862
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AACTAGGGCATTCCGTTGGG
Suggested primer 2:GTTGGGGATTTGGGGATCGT