Insertion junction: CLIP2.059426_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059426
Chromosome:chromosome 13
Location:3700240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588350 (1 of 1) IPR000403//IPR011009 - Phosphatidylinositol 3-/4-kinase, catalytic domain // Protein kinase-like domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTAGCATGGCCGCTGTAGCCCCCCGGTCGGAGAAGCCAGCGGCCTAGTG
Internal bar code:CTTTTGATAATCTATTTCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1650
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGATACGTGCCGCATGG
Suggested primer 2:GCCCTGTTGACGAAACACAC