Insertion junction: CLIP2.059428_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059428
Chromosome:chromosome 7
Location:5241622
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g349250 (1 of 5) IPR011051//IPR013096 - RmlC-like cupin domain // Cupin 2, conserved barrel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGAGCCGCAGGGCCACGTGTGAAGATGCGGTGGCGTACAGTAAAGCGA
Internal bar code:TGAATACCTCATTGCATCGGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1257
LEAP-Seq percent confirming:29.4118
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTACTCAAAGCTCCTGCA
Suggested primer 2:TGTCATGTGTGCGTACCCTC