Insertion junction: CLIP2.059429_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059429
Chromosome:chromosome 12
Location:6572418
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538400 RPB4,RPB7B (1 of 1) K03022 - DNA-directed RNA polymerase III subunit RPC8 (RPC8, POLR3H); DNA-directed RNA polymerase II, 19 kDa polypeptide 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCGCTGATGTGTGTGACGAGCTCTGTTCTGTGCTTCTGGGCGACAGT
Internal bar code:GATTTGACGCCTATGTAAGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2330
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGTGCTACGACACGGTTT
Suggested primer 2:GCTGCTCGAATGCTGAATGG