Insertion junction: CLIP2.059432_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059432
Chromosome:chromosome 13
Location:60655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g562150 (1 of 1) PTHR23305:SF12 - GTP-BINDING PROTEIN-RELATED 5'UTR
Cre13.g562200 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTACTTACTTACTGTCGGGCGCTGAGCGAGTGGTTGCCTGAGGATCGT
Internal bar code:CAGTGTTAGTGACTGTTCAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3887
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CACACTTGATGCTGATGCGG
Suggested primer 2:CGTGCAAGATATGGCTTGGC