Insertion junction: CLIP2.059439_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059439
Chromosome:chromosome 11
Location:410566
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g801231 (1 of 41) IPR000719//IPR011009 - Protein kinase domain // Protein kinase-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACCCCTGGGTAAGGACACTGGATGAGAGGATGAGACGGGGCAGGGCTG
Internal bar code:GAAAAGGTAGGTGTAAGCTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:7189
LEAP-Seq percent confirming:98.9691
LEAP-Seq n confirming:96
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGTTGCTTCAAGTGTGG
Suggested primer 2:GAGTAGGGCTTGCTCGCTAG