Insertion junction: CLIP2.059440_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.059440
Chromosome:chromosome 16
Location:5208945
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g684600 SEC5 (1 of 1) K17637 - exocyst complex component 2 (EXOC2, SEC5); Component of the Exocyst Complex 3'UTR
Cre16.g684650 (1 of 2) PTHR13748//PTHR13748:SF45 - COBW-RELATED // SUBFAMILY NOT NAMED; Putative metallochaperone 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGGGACATAAATCAACTGACAGTTGGATGCCGGATTCAGGATGCATC
Internal bar code:TCATATGAACTTGTATCTACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:2029
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:AGACCTGAACATGGCCATGG
Suggested primer 2:CAGTAACGCGTGCCATTACG