Insertion junction: CLIP2.059442_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059442
Chromosome:chromosome 6
Location:8536012
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g309500 OPR28 OctotricoPeptide Repeat protein 28 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGGTTTGGGCTGGTATGCTTCACAGTAATAAATGGTGTATTATAATT
Internal bar code:GAGACGTTTTATCTTATTTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:715
LEAP-Seq percent confirming:57.1429
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GTAAACGCGGGAAATCGAGC
Suggested primer 2:TGGCTGTTTCGTCCTGAGAC