Insertion junction: CLIP2.059449_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.059449
Chromosome:chromosome 2
Location:3168185
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g096601 (1 of 1) IPR001440//IPR013026//IPR019734 - Tetratricopeptide repeat 1 // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGGTTGTCAGCCATGGCGCGTTTCAGCGCGTCCTGTGACACATGGCC
Internal bar code:GATAGAATTTTTGTTTGGAGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:866
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGCAAACACACATACACA
Suggested primer 2:CCCTTCCCTACCCTACCGAA