Insertion junction: CLIP2.059457_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.059457
Chromosome:chromosome 3
Location:3755594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169350 (1 of 3) IPR007860 - DNA mismatch repair protein MutS, connector domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGCGCGACCAGCTGTGGGCAGGCATGCGCTGCGTTGGCTCGAGCGGT
Internal bar code:TAGATTTAGTAAGAATGATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2181
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTCGAACAGTCACAGGG
Suggested primer 2:GTCAATCAACTCATCGCGGC