Insertion junction: CLIP2.059457_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.059457
Chromosome:chromosome 3
Location:3755600
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169350 (1 of 3) IPR007860 - DNA mismatch repair protein MutS, connector domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTAATTTATCAGGCAGTCAAGTATATGAGCCTAGGCTCCACGCGGTTC
Internal bar code:GCAGGTCTGTGTGACATCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3645
LEAP-Seq percent confirming:88.3721
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAATCAACTCATCGCGGC
Suggested primer 2:AGCTTCGAACAGTCACAGGG